1. Msatcommander
https://code.google.com/p/msatcommander/downloads/list或https://github.com/brantfaircloth/msatcommander
2. inGAP
http://sourceforge.net/projects/ingap/files/
3. Java
https://www.java.com/zh_CN/download/manual.jsp
4. MicroFamily
http://net.imbe.fr/~emeglecz/MicroFamily.html或https://people.imbe.fr/~emeglecz/prg.html
5. GelQuest
http://sequentix.de/gelquest/index.php
6. GenAlEx
http://biology-assets.anu.edu.au/GenAlEx/Download.html
7. Genepop
http://kimura.univ-montp2.fr/~rousset/Genepop.htm
8. SGoF
http://webs.uvigo.es/acraaj/SGoF.htm或http://myriads.webs.uvigo.es/
9. ADZE
http://web.stanford.edu/group/rosenberglab/adzeDownload.html或https://web.stanford.edu/group/rosenberglab/adze.html
10. Genetix
http://kimura.univ-montp2.fr/genetix/constr.htm#download
11. Arlequin
http://cmpg.unibe.ch/software/arlequin35
12. Structure
http://pritchardlab.stanford.edu/structure.html
13. CONVERT(网站不能访问了,经原作者同意,我把程序放到了“演示数据和相关程序下载”处)
http://www.agriculture.purdue.edu/fnr/html/faculty/Rhodes/Students%20and%20Staff/glaubitz/software.htm
14. STRUCTURE软件计算结果再分析:deltaK 法
http://taylor0.biology.ucla.edu/struct_harvest/
15. CLUMPP
http://rosenberglab.stanford.edu/clumpp.html
16. TESS
http://membres-timc.imag.fr/Olivier.Francois/tess.html
17. PAST
http://folk.uio.no/ohammer/past/或https://www.nhm.uio.no/english/research/resources/past/
18. TESS Ad-Mixer
http://www.pages.drexel.edu/~mkg62/software.html
19. R
https://cran.r-project.org/
20. Alleles in space
http://www.marksgeneticsoftware.net/AISInfo.htm
21. Surfer
http://www.goldensoftware.com/products/surfer#
https://www.rockware.com/product/productDemo.php?id=129
http://www.cabit.com.cn/products/stat/surfer/freetrial.html
22. SPAGeDi
http://ebe.ulb.ac.be/ebe/SPAGeDi.html
23. PASSaGE
http://passagesoftware.net/
24. IBD分析
http://www.bio.sdsu.edu/pub/andy/IBD.html
http://ibdws.sdsu.edu/~ibdws/
25. ArcGIS
http://www.esri.com/
26. ET GeoWizards
http://www.ian-ko.com/